Books

Cracraft, J. & Donoghue, M.J. (eds.), 2004. Assembling the Tree of Life. Oxford University Press.: 1-576.

Articles

Cantino, P.D., Doyle, J.A., Graham, S.W., Judd, W.S., Olmstead, R.G., Soltis, D.E., Soltis, P.S. & Donoghue, M.J., 2007. Towards a phylogenetic nomenclature of Tracheophyta. Taxon 56 (3), Aug 2007: 822-846, E1-E44. ≡

Penagos Zuluaga, J.C., van der Werff, H., Park, B., Eaton, D.A.R., Comita, L.S., Queenborough, S.A. & Donoghue, M.J., 2021. Resolved phylogenetic relationships in the Ocotea complex (Supraocotea) facilitate phylogenetic classification and studies of character evolution. Amer. J. Bot. 108 (4), Apr 2021: 664-679. ≡

Chapters

Donoghue, M.J., 2004. Immeasurable Progress on the Tree of Life. Oxford University Press.: 548-552.

Cantino, P.D. & Donoghue, M.J., 2020. Pan-Tracheophyta P. D. Cantino and M. J. Donoghue in P. D. Cantino et al. (2007): 830 [P. D. Cantino and M. J. Donoghue], converted clade name. In K. de Queiroz, P.D. Cantino & J.A. Gauthier (eds.), Phylonyms. CRC Press, Boca Raton, 30 Apr 2020: [227]-228.

Cantino, P.D. & Donoghue, M.J., 2020. Apo-Tracheophyta P. D. Cantino and M. J. Donoghue in P. D. Cantino et al. (2007): E10 [P. D. Cantino and M. J. Donoghue], converted clade name. In K. de Queiroz, P.D. Cantino & J.A. Gauthier (eds.), Phylonyms. CRC Press, Boca Raton, 30 Apr 2020: [229]-230.

Cantino, P.D. & Donoghue, M.J., 2020. Tracheophyta E. W. Sinnott 1935: 441 [P. D. Cantino and M. J. Donoghue], converted clade name. In K. de Queiroz, P.D. Cantino & J.A. Gauthier (eds.), Phylonyms. CRC Press, Boca Raton, 30 Apr 2020: [231]-233.

Cantino, P.D. & Donoghue, M.J., 2020. Pan-Lycopodiophyta P. D. Cantino and M. J. Donoghue in P. D. Cantino et al. (2007): E11 [P. D. Cantino and M. J. Donoghue], converted clade name. In K. de Queiroz, P.D. Cantino & J.A. Gauthier (eds.), Phylonyms. CRC Press, Boca Raton, 30 Apr 2020: [235]-236.

Cantino, P.D. & Donoghue, M.J., 2020. Lycopodiophyta A. Cronquist, A. Takhtajan, and W. Zimmermann 1966: 133 [P. D. Cantino and M. J. Donoghue], converted clade name. In K. de Queiroz, P.D. Cantino & J.A. Gauthier (eds.), Phylonyms. CRC Press, Boca Raton, 30 Apr 2020: [237]-240.

Cantino, P.D. & Donoghue, M.J., 2020. Pan-Euphyllophyta P. D. Cantino and M. J. Donoghue in P. D. Cantino et al. (2007): E12 [P. D. Cantino and M. J. Donoghue], converted clade name. In K. de Queiroz, P.D. Cantino & J.A. Gauthier (eds.), Phylonyms. CRC Press, Boca Raton, 30 Apr 2020: [241]-242.

Cantino, P.D. & Donoghue, M.J., 2020. Euphyllophyta G. Lecointre and H. Le Guyader 2006: 181 [P. D. Cantino and M. J. Donoghue], converted clade name. In K. de Queiroz, P.D. Cantino & J.A. Gauthier (eds.), Phylonyms. CRC Press, Boca Raton, 30 Apr 2020: [243]-246.

Cantino, P.D., Doyle, J.A. & Donoghue, M.J., 2020. Pan-Spermatophyta P. D. Cantino and M. J. Donoghue in P. D. Cantino et al. (2007): 831 [P. D. Cantino, J. A. Doyle, and M. J. Donoghue], converted clade name. In K. de Queiroz, P.D. Cantino & J.A. Gauthier (eds.), Phylonyms. CRC Press, Boca Raton, 30 Apr 2020: [253]-254.

Cantino, P.D., Doyle, J.A. & Donoghue, M.J., 2020. Apo-Spermatophyta P. D. Cantino and M. J. Donoghue in P. D. Cantino et al. (2007): 831 [P. D. Cantino, J. A. Doyle, and M. J. Donoghue], converted clade name. In K. de Queiroz, P.D. Cantino & J.A. Gauthier (eds.), Phylonyms. CRC Press, Boca Raton, 30 Apr 2020: [255]-257.

Cantino, P.D., Doyle, J.A. & Donoghue, M.J., 2020. Spermatophyta N. L. Britton and A. Brown 1896: 49 [P. D. Cantino, J. A. Doyle, and M. J. Donoghue], converted clade name. In K. de Queiroz, P.D. Cantino & J.A. Gauthier (eds.), Phylonyms. CRC Press, Boca Raton, 30 Apr 2020: [259]-261.

Cantino, P.D., Doyle, J.A. & Donoghue, M.J., 2020. Angiospermae J. Lindley 1830: xxxvi [P. D. Cantino, J. A. Doyle, and M. J. Donoghue], converted clade name. In K. de Queiroz, P.D. Cantino & J.A. Gauthier (eds.), Phylonyms. CRC Press, Boca Raton, 30 Apr 2020: [283]-287.

Donoghue, M.J. & Cantino, P.D., 2020. Campanulidae M. J. Donoghue and P. D. Cantino in P. D. Cantino et al. (2007): 837 [M. J. Donoghue and P. D. Cantino], converted clade name. In K. de Queiroz, P.D. Cantino & J.A. Gauthier (eds.), Phylonyms. CRC Press, Boca Raton, 30 Apr 2020: [373]-375.

Donoghue, M.J. & Cantino, P.D., 2020. Apiidae M. J. Donoghue and P. D. Cantino in P. D. Cantino et al. (2007): E31 [M. J. Donoghue and P. D. Cantino], converted clade name. In K. de Queiroz, P.D. Cantino & J.A. Gauthier (eds.), Phylonyms. CRC Press, Boca Raton, 30 Apr 2020: [377]-379.

Donoghue, M.J., Doyle, J.A. & Cantino, P.D., 2020. Gnetophyta C. E. Bessey 1907: 323 (as “Gnetales”; Hoogland and Reveal, 2005) [M. J. Donoghue, J. A. Doyle, and P. D. Cantino], converted clade name. In K. de Queiroz, P.D. Cantino & J.A. Gauthier (eds.), Phylonyms. CRC Press, Boca Raton, 30 Apr 2020: [265]-267.

Donoghue, M.J., Doyle, J.A. & Cantino, P.D., 2020. Mesangiospermae M. J. Donoghue, J. A. Doyle, and P. D. Cantino in P. D. Cantino et al. (2007): 834 [M. J. Donoghue, J. A. Doyle, and P. D. Cantino], converted clade name. In K. de Queiroz, P.D. Cantino & J.A. Gauthier (eds.), Phylonyms. CRC Press, Boca Raton, 30 Apr 2020: [289]-292.

Donoghue, M.J., Doyle, J.A. & Cantino, P.D., 2020. Tricolpatae M. J. Donoghue, J. A. Doyle, and P. D. Cantino in P. D. Cantino et al. (2007): E26 [M. J. Donoghue, J. A. Doyle, and P. D. Cantino], converted clade name. In K. de Queiroz, P.D. Cantino & J.A. Gauthier (eds.), Phylonyms. CRC Press, Boca Raton, 30 Apr 2020: [311]-312.

Donoghue, M.J., Doyle, J.A. & Cantino, P.D., 2020. Eudicotyledoneae M. J. Donoghue, J. A. Doyle, and P. D. Cantino in P. D. Cantino et al. (2007): 835 [M. J. Donoghue, J. A. Doyle, and P. D. Cantino], converted clade name. In K. de Queiroz, P.D. Cantino & J.A. Gauthier (eds.), Phylonyms. CRC Press, Boca Raton, 30 Apr 2020: [313]-315.

Doyle, J.A., Cantino, P.D. & Donoghue, M.J., 2020. Monilophyta P. D. Cantino and M. J. Donoghue in P. D. Cantino et al. (2007): E13 [J. A. Doyle, P. D. Cantino, and M. J. Donoghue], converted clade name. In K. de Queiroz, P.D. Cantino & J.A. Gauthier (eds.), Phylonyms. CRC Press, Boca Raton, 30 Apr 2020: [247]-251.

Doyle, J.A., Cantino, P.D. & Donoghue, M.J., 2020. Pan-Coniferae P. D. Cantino, M. J. Donoghue, and J. A. Doyle in P. D. Cantino et al. (2007): E20 [J. A. Doyle, P. D. Cantino, and M. J. Donoghue], converted clade name. In K. de Queiroz, P.D. Cantino & J.A. Gauthier (eds.), Phylonyms. CRC Press, Boca Raton, 30 Apr 2020: [269]-270.

Doyle, J.A., Cantino, P.D. & Donoghue, M.J., 2020. Coniferae A. L. Jussieu 1789: 411 [J. A. Doyle, P. D. Cantino, and M. J. Donoghue], converted clade name. In K. de Queiroz, P.D. Cantino & J.A. Gauthier (eds.), Phylonyms. CRC Press, Boca Raton, 30 Apr 2020: [271]-274.

Doyle, J.A., Cantino, P.D. & Donoghue, M.J., 2020. Pan-Angiospermae P. D. Cantino and M. J. Donoghue in Cantino et al. (2007): 833 [J. A. Doyle, P. D. Cantino, and M. J. Donoghue], converted clade name. In K. de Queiroz, P.D. Cantino & J.A. Gauthier (eds.), Phylonyms. CRC Press, Boca Raton, 30 Apr 2020: [279]-280.

Doyle, J.A., Donoghue, M.J. & Cantino, P.D., 2020. Pan-Gnetophyta J. A. Doyle, M. J. Donoghue, and P. D. Cantino in Cantino et al. (2007): E22 [J. A. Doyle, M. J. Donoghue, and P. D. Cantino], converted clade name. In K. de Queiroz, P.D. Cantino & J.A. Gauthier (eds.), Phylonyms. CRC Press, Boca Raton, 30 Apr 2020: [263]-264.

Graham, S.W., Cantino, P.D. & Donoghue, M.J., 2020. Cupressophyta P. D. Cantino and M. J. Donoghue, in P. D. Cantino et al. 2007:832 [S. W. Graham, P. D. Cantino and M. J. Donoghue], converted clade name. In K. de Queiroz, P.D. Cantino & J.A. Gauthier (eds.), Phylonyms. CRC Press, Boca Raton, 30 Apr 2020: [275]-277.