Phylum Ascomycota Caval.-Sm. (1998) - sac fungi
   Subphylum Pezizomycotina O.E. Erikss. & Winka (1997)
     Class Dothideomycetes O.E. Erikss. & Winka (1997)
       Order Trypetheliales Lücking, Aptroot & Sipman (2008), incertae sedis
         Family Trypetheliaceae Zenker (1827)
           01 Genus Alloarthopyrenia Phukhams., Lücking & K.D.Hyde (2016)
           02 Genus Aptrootia Lücking & Sipman (2007)
           03 Genus Architrypethelium Aptroot (1991)
           04 Genus Astrothelium Eschw. (1824)
           05 Genus Bathelium Ach. (1803)
           06 Genus Bogoriella Zahlbr. (1928)
           07 Genus Constrictolumina Lücking, M.P. Nelsen & Aptroot (2016)
           08 Genus Dictyomeridium Aptroot, M.P. Nelsen & Lücking (2016)
           09 Genus Distothelia Aptroot (2005)
           10 Genus Marcelaria Aptroot, Nelsen & Parnmen (2013)
           11 Genus Nigrovothelium Lücking, M.P. Nelsen & Aptroot (2016)
           12 Genus Novomicrothelia Aptroot, M.P. Nelsen & Lücking (2016)
           13 Genus Polymeridium (Müll.Arg.) R.C. Harris (1980)
           14 Genus Polypyrenula D.Hawksw. (1985)
           15 Genus Pseudopyrenula Müll.Arg. (1883)
           16 Genus Trypethelium Spreng. (1804), nom. cons.
           17 Genus Viridothelium Lücking, M.P. Nelsen & Aptroot (2016)