organisms see Clade Biota Wagner 2004 [Wiemann, de Queiroz, Rowe, Planavsky, Anderson, Gogarten, Turner & Gauthier 2020]
   Domain eukaryotes see Domain Eukaryota Chatton, 1925
     flagellated protists
       residual free-living and predatory heterotrophic flagellates
         001 Genus Acinetactis Stokes, 1886
         002 Genus Allantion Sandon, 1924
         003 Genus Allas Sandon, 1927
         004 Genus Alphamonas Alexeieff, 1918 see Genus Colpodella Cienkowski, 1865
         005 Genus Amphimonas Dujardin, 1841
         006 Genus Ancyromonas Kent, 1880
         007 Genus Anehmia Ekebom, Patterson & Vørs, 1996
         008 Family Apusomonadidae Karpov & Mylnikov, 1989
         009 Genus Artodiscus Penard, 1890
         010 Genus Bilorum Calaway, 1960
         011 Genus Bodomorpha A.C. Hollande, in P.-P. Grassé, 1952
         012 Genus Bodopsis E.J. Lemmermann, 1913
         013 Genus Bordnamonas Larsen & Patterson, 1990
         014 Genus Caecitellus Patterson et al., 1993
         015 Genus Carpediemonas Ekebom, Patterson & Vørs, 1996
         016 Genus Clautriavia Massart, 1900
         017 cercomonads see Order Cercomonadida Poche, 1913
         018 Genus Cladomonas Stein, 1878
         019 Genus Codonoeca James-Clark, 1866
         020 Genus Collodictyon Carter, 1865
         021 Genus Colponema Stein, 1878
         022 Genus Cruzella de Faria et al., 1923
         023 Genus Cryothecomonas Thomsen et al., 1991
         024 Genus Cryptaulax Skuja (1948) see Genus Rhynchobodo J.B. Lackey, 1940
         025 Genus Cyathomonas Fromentel (1874)
         026 Genus Cyclomonas Fromentel, 1874
         027 Genus Dallingeria Kent, 1880
         028 dimorphids see Order Dimorphida Siemensma, 1991
         029 Genus Dingensia Patterson & Zölffel, 1991 see Genus Colpodella Cienkowski, 1865
         030 Genus Dinomonas Kent, 1880
         031 Genus Diphylleia Massart, 1920
         032 Genus Diplocalium Grassé & Deflandre, 1952
         033 Genus Diploselmis Kent, 1881
         034 Genus Discocelis Vørs, 1988, nom. illeg. see Genus Discocelia Cavalier-Smith, 2012
         035 Family Ebriidae Poche, 1913
         036 Genus Entomosigma Schiller (1925) see Genus Hemistasia Griessmann, 1913
         037 Genus Errera Schouteden, 1907
         038 Genus Fromentella Patterson & M. Zölffel, 1992
         039 Genus Glissandra Patterson & Simpson, 1996
         040 Genus Gymnophrys Cienkowski, 1876
         041 Genus Heliobodo Valkanov, 1928
         042 Genus Hemistasia Griessmann, 1913
         043 jakobids see [unranked] Jakobida Cavalier-Smith, 1993
         044 Genus Kamera (Woodcock, 1916) Patterson & Zölffel, 1991
         045 Family Kathablepharidae Vørs, 1992, orth. zool.
         046 Genus Kiitoksia Vørs, 1992
         047 Genus Macapella Patterson & Zölffel, 1991 see Genus Macappella Patterson & Zölffel, 1991
         048 Genus Metopion Larsen & Patterson, 1990
         049 Genus Metromonas Larsen & Patterson, 1990
         050 Genus Microcometes Cienkowski, 1876
         051 Genus Multicilia Cienkowski, 1881
         052 Genus Nephromonas M.R. Droop, 1953 see Genus Colpodella Cienkowski, 1865
         053 Genus Palustrimonas Patterson & Simpson, 1996
         054 Genus Parabodo Skuja, 1939
         055 Genus Paramastix Skuja, 1948
         056 Genus Paramonas Kent, 1880
         057 Genus Peltomonas Vlk (1942)
         058 Genus Petasaria Moestrup (1979)
         059 Genus Phalansterium Stein, 1878
         060 Genus Phanerobia Skuja, 1948
         061 Genus Phyllomitus Stein, 1878
         062 Genus Phyllomonas Klebs, 1892
         063 Genus Pirsonia Schnepf et al. (1990)
         064 Genus Platytheca Stein (1878)
         065 Genus Pleurostomum Namyslovsky, 1913
         066 Genus Postgaardi T. Fenchel et al., 1995
         067 Genus Proleptomonas Woodcock, 1916
         068 Order Pseudodendromonadida Hibberd, 1985
         069 Genus Quadricilia Vørs, 1992
         070 Genus Rhizomonas Kent, 1880
         071 Genus Rigidomastix Aléxéieff, 1929
         072 Genus Sainouron Sandon, 1924
         073 Genus Salpingorhiza Klug, 1936
         075 Family Spongomonadidae Hibberd, 1983
         076 Genus Stephanomonas Kent, 1881
         077 Genus Stephanopogon G. Entz, 1884
         078 Genus Streptomonas Klebs, 1892
         079 Genus Telonema Griessmann, 1913
         080 Genus Tetracilia Valkanov, 1970
         081.1 Family Thaumatomastigidae Patterson & Zölffel, 1991
         081.2 Family Thaumatomastigaceae Patterson & Zölffel (1991) see Family Thaumatomastigidae Patterson & Zölffel, 1991
         081.3 Family Thaumatomonadidae Patterson & Zölffel, 1991 see Family Thaumatomastigidae Patterson & Zölffel, 1991
         082 Genus Toshiba Patterson & M. Zölffel, in D.J. Patterson & J. Larsen, 1991
         083 Genus Trichonema Fromentel, 1874
         084 Genus Trimastix Kent, 1880
         085 "uncertain nature"
         086.1 ?Genus Peliainia
         086.2 ?Genus Strombilomonas nom. null. see Genus Strobilomonas J. Schiller (1954)
         086.3 ?Genus Cyanomastix Lackey (1936)
         087 ?Genus Akaiyamamonas Skvortzkov
         088 ?Genus Brasilobia B.V. Skvortzov & M. Noda, 1968
         089 ?Genus Colemania B.V. Skvortzov & M. Noda, 1968
         090 ?Genus Foliomonas Skvortzkov
         091 ?Genus Gordymonas B.V. Skvortzov & M. Noda, 1968
         092 ?Genus Jolya Skvortzov & Noda (1968)
         093 ?Genus Kisselivia Skvortzkov
         094 ?Genus Kuzminia Skvortzov, 1958
         095 ?Genus Liouamonas Skvortzkov
         096 ?Genus Loukashkinia B.V. Skvortzov, 1969
         097 ?Genus Meyerella Skvortzkov
         098 ?Genus Nodamastix B.V. Skvortzov & M. Noda, 1968
         099 ?Genus Pavloviamonas B.V. Skvortzov & M. Noda, 1968
         100 ?Genus Proctormonas B.V. Skvortzov & M. Noda, 1968
         101 ?Genus Prowsemonas B.V. Skvortzov & M. Noda, 1968
         102 ?Genus Serpentomonas B.V. Skvortzov, 1958
         103 ?Genus Skvortzoviella P. Bourrelly (1970)
         104 ?Genus Spiromonas B.V. Skvortzov, 1958, nom. illeg. see Genus Nodamastix B.V. Skvortzov & M. Noda, 1968
         105 ?Genus Stigmobodo B.V. Skvortzov & M. Noda, 1968
         106 ?Genus Harbinia Zhou et al., 1993